| Preface |
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xi | |
| Acronyms, Abbreviations, and Symbols |
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xiii | |
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1 | (8) |
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What is Ecological Genetics? |
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1 | (2) |
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3 | (1) |
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4 | (5) |
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Population genetics I: Genetic variation, random and nonrandom mating |
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9 | (38) |
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What is Population Genetics? |
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9 | (2) |
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What are populations and why are they important? |
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9 | (2) |
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11 | (1) |
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Measuring Genetic Variation: Genetic Markers |
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12 | (10) |
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13 | (1) |
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13 | (1) |
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14 | (2) |
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16 | (6) |
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Measuring Genetic Variation: Simple Summary Statistics |
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22 | (2) |
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Organization of Genetic Variation within Populations |
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24 | (7) |
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25 | (1) |
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Assumptions of the Hardy-Weinberg model |
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25 | (1) |
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26 | (1) |
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Deriving the Hardy-Weinberg equations |
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27 | (4) |
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Uses of the Hardy-Weinberg Model: Tests for Departure from HWE |
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31 | (5) |
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A Brief Introduction to Statistics |
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32 | (3) |
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Recessive alleles hidden in heterozygotes |
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35 | (1) |
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36 | (7) |
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36 | (1) |
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37 | (6) |
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43 | (1) |
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44 | (1) |
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44 | (3) |
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Population genetics II: Changes in allele frequency |
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47 | (50) |
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47 | (1) |
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48 | (4) |
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52 | (14) |
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52 | (3) |
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Population differentiation |
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55 | (2) |
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57 | (3) |
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Calculation of F-Statistics |
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60 | (2) |
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Effective population size (Ne) |
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62 | (3) |
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Inbreeding with random mating in small populations |
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65 | (1) |
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Natural Selection: Selection on Genotypes |
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66 | (11) |
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Example of Inbreeding Depression Due to Genetic Drift |
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66 | (1) |
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67 | (2) |
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How does selection at one locus change allele frequencies at that locus? |
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69 | (2) |
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Overdominance or heterozygote advantage |
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71 | (5) |
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Frequency dependent selection |
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76 | (1) |
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Population Genetics: Synthesis |
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77 | (2) |
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Interactions Between the Four Evolutionary Forces |
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79 | (10) |
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Mutation--selection balance |
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79 | (2) |
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81 | (1) |
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Selection vs. genetic drift |
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81 | (3) |
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Migration vs. genetic drift |
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84 | (1) |
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Methods of measuring gene flow |
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85 | (1) |
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Selection, genetic drift, and gene flow: Wright's shifting balance theory |
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86 | (3) |
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89 | (3) |
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92 | (1) |
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Suggested Readings Questions |
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92 | (2) |
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94 | (3) |
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Quantitative genetics I: Genetic variation |
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97 | (40) |
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Mendelian Basis of Continuous Traits |
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97 | (15) |
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Different types of gene action |
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103 | (1) |
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How can we quantify gene action? |
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104 | (2) |
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106 | (2) |
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108 | (3) |
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111 | (1) |
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112 | (3) |
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Estimating Additive Variance and Heritability |
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115 | (18) |
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Offspring--parent regression |
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116 | (2) |
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118 | (2) |
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Maternal and paternal effects |
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120 | (1) |
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121 | (1) |
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Analysis of Variance (Anova) |
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122 | (9) |
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131 | (2) |
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133 | (1) |
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134 | (1) |
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Suggested Readings Questions |
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134 | (1) |
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135 | (2) |
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Quantitative genetics II: Advanced topics |
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137 | (52) |
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Phenotypic Plasticity and Genotype-by-Environment Interaction |
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138 | (7) |
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141 | (4) |
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Multiple Subpopulations---Differentiation vs. Adaptive Plasticity |
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145 | (5) |
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Correlations Among Traits |
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150 | (13) |
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Sources of genetic covariance among traits |
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155 | (5) |
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What can cause linkage disequilibrium? |
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160 | (1) |
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Mechanisms of genetic correlations in nature |
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160 | (3) |
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163 | (7) |
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Advantages and disadvantages of artificial selection |
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169 | (1) |
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170 | (10) |
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180 | (3) |
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183 | (1) |
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Suggested Readings Questions |
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184 | (2) |
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186 | (3) |
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Natural selection on phenotypes |
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189 | (42) |
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The Chicago School Approach to Phenotypic Evolution |
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191 | (5) |
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Selective Agents and Targets |
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196 | (19) |
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Multiple traits; direct and indirect selection |
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199 | (1) |
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200 | (5) |
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Experimental manipulation |
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205 | (3) |
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208 | (3) |
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How do we study selective agents? |
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211 | (4) |
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Notes on the Study of Adaptation |
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215 | (1) |
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Synthesis: Predicting Short-Term Phenotypic Evolution |
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216 | (7) |
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Summary of Bivariate Relationships in Ecological Genetics |
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217 | (6) |
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The Future of Ecological Genetics |
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223 | (1) |
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224 | (2) |
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226 | (1) |
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Suggested Readings Questions |
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227 | (2) |
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229 | (2) |
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Applied ecological genetics |
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231 | (38) |
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232 | (13) |
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What is the unit to be conserved? |
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233 | (2) |
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How do genetic factors directly affect extinction risk? |
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235 | (6) |
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Adaptation to environmental change in the future |
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241 | (3) |
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Conservation genetics in the future |
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244 | (1) |
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Evolution of Invasive Species |
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245 | (3) |
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248 | (5) |
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Establishment of transgenes in wild populations |
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250 | (1) |
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Fitness effects of transgenes |
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250 | (2) |
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Strategies to reduce transgene escape risk |
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252 | (1) |
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Evolution of Resistance to Pesticides and Antibiotics |
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253 | (9) |
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254 | (3) |
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Genetic variance and covariance |
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257 | (2) |
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Gene flow and population structure |
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259 | (1) |
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260 | (2) |
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The Future of Applied Ecological Genetics |
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262 | (1) |
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263 | (1) |
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Suggested Readings Questions |
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263 | (2) |
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265 | (4) |
| Appendix |
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269 | (2) |
| Glossary |
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271 | (13) |
| Index |
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284 | |